BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022E04LP1|AL427909
(854 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig758 1657 0.0
>3x_Contig758
Length = 3384
Score = 1657 bits (836), Expect = 0.0
Identities = 843/844 (99%), Gaps = 1/844 (0%)
Strand = Plus / Plus
Query: 12 gatcttttgtgttgttttttttttgaactaaagtaaatcgcatagaaaaaacaaggaaga 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2021 gatcttttgtgttgttttttttttgaactaaagtaaatcgcatagaaaaaacaaggaaga 2080
Query: 72 acttatattcttccccagattattcttcattgagaatttataattccttgaaacagtctc 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2081 acttatattcttccccagattattcttcattgagaatttataattccttgaaacagtctc 2140
Query: 132 tcttgaagaaagccaatttcaaccaatcagcaataaccttgaatctggatctggcagata 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2141 tcttgaagaaagccaatttcaaccaatcagcaataaccttgaatctggatctggcagata 2200
Query: 192 agatcataccaacgtatagaactctccagatgtagaaggtaatcaaaccaccaccagtgt 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2201 agatcataccaacgtatagaactctccagatgtagaaggtaatcaaaccaccaccagtgt 2260
Query: 252 agaaggaacgcttaccgtaagtgatgttggcaatggccttttcagcacccaagtaagcca 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2261 agaaggaacgcttaccgtaagtgatgttggcaatggccttttcagcacccaagtaagcca 2320
Query: 312 aggcacccaaatggacgtacttgaatggcttgaaaccgttttcttcgaatagcaagtcga 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2321 aggcacccaaatggacgtacttgaatggcttgaaaccgttttcttcgaatagcaagtcga 2380
Query: 372 tcttttcctttctggtagccaattcttgttggaaacctgggattttagccatcttgtcga 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2381 tcttttcctttctggtagccaattcttgttggaaacctgggattttagccatcttgtcga 2440
Query: 432 aga-cttagccaagtattcagcttgttgatgagcaacttgagcagttggaggcagaccag 490
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2441 agaccttagccaagtattcagcttgttgatgagcaacttgagcagttggaggcagaccag 2500
Query: 491 caaaagcgttgtcaccgatagcgaagatgttgttagagcccttgaccaacaagtgttcgt 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2501 caaaagcgttgtcaccgatagcgaagatgttgttagagcccttgaccaacaagtgttcgt 2560
Query: 551 caacgttcaaagctcttgtggaagcattttgttcagtgattttcttaaacaagtcagtaa 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2561 caacgttcaaagctcttgtggaagcattttgttcagtgattttcttaaacaagtcagtaa 2620
Query: 611 cgataggtctagccttgttaccggtagcccaaatcaaagtaccgtatgggacagtctgtt 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2621 cgataggtctagccttgttaccggtagcccaaatcaaagtaccgtatgggacagtctgtt 2680
Query: 671 cggtgacattaccatcagcatccttggtcttagcgatcaagtggtctttttcgaccttac 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2681 cggtgacattaccatcagcatccttggtcttagcgatcaagtggtctttttcgaccttac 2740
Query: 731 caacagcagttctcaacatcaaattgatattagtcttggacaaaacgtcttgagcgtaag 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2741 caacagcagttctcaacatcaaattgatattagtcttggacaaaacgtcttgagcgtaag 2800
Query: 791 aggtcaatttcttttcgaacatgtttagaacgtttggcaaagcttcaaccaaatggattt 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2801 aggtcaatttcttttcgaacatgtttagaacgtttggcaaagcttcaaccaaatggattt 2860
Query: 851 gaac 854
||||
Sbjct: 2861 gaac 2864
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7819
Number of Sequences: 1807
Number of extensions: 7819
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 854
length of database: 10,358,551
effective HSP length: 16
effective length of query: 838
effective length of database: 10,329,639
effective search space: 8656237482
effective search space used: 8656237482
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)